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GENECAP:
We created GENECAP to assist the wildlife researcher or manager in
efficient analysis and formatting of nuclear DNA genotypes for the
purpose of population estimation. GENECAP is a Microsoft Excel macro
with the primary input of multi-locus genotypes. GENECAP compares each
individual multi-locus genotype with all other genotypes within the
dataset to determine matching genotypes. One major feature of GENECAP
is the ability to include genotypes with missing scores for loci. After
matches are determined, GENECAP creates capture histories and
calculates match probabilities in a worksheet that can then be used to
derive population estimates in such programs as CAPTURE (White et al.
1982) and MARK (White and Burnham 2000). In addition, GENECAP
calculates allele frequencies, probability of identity (PI) values,
reports genotypes that are problematic, and multi-locus genotypes
that differ by 1 and 2 alleles.
(last
updated 10-26-2008)
Download
GENECAP
Download
User Manual
Download
MEN paper on
GENECAP
AD Model Builder text editor and compiler:
AD Model Builder is an open source platform for statistical model
development (http://admb-project.org/).
We have developed an emacs text editing system with a drop-down menu
specifically for ADMB. The zip file includes emacs modified with an
additional menu bar option when a .tpl file is opened for use with ADMB
and a version of the MinGW
C++ complier. This menu system was initially developed by Mike Rutter.
For ADMB without random effects
module
Download Emacs - MinGW
self extracting zip file
Download
installation instructions
For ADMB with random effects module
Download
Emacs - MinGW self extracting zip file
Download
installation instructions
How
to modify the menu bar for different compilers
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